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Concept Library Documentation

Overview

The concept library is a system for storing, managing, sharing, and documenting clinical code lists in health research. The specific goals of this work are:

  • Store To store code lists along with metadata that which captures important information about quality, author, etc.
  • Store To store version history and provide a way to unambiguously reference a particular version of a code list.
  • Allow Allowing programmatic interaction with code lists via an API, so that they can be directly used in queries, statistical scripts, etc.
  • Provide Providing a mechanism for sharing code lists between projects and organizations.

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The Concept Library is currently available to users of the SAIL Databank.

A user can Log-in using your their SAIL credentials to on the following siteswebsites:

External: conceptlibrary.saildatabank.com

Internal: conceptlibrary.sail.ukserp.ac.uk (enter this address in your web browser inside the SAIL gateway).

General Information

01 Introduction to the Concept Library

Tutorials

02 Search and View Concepts

03 Creating and Editing Concepts

04 Create and Edit Working Sets

06 Connecting to the Concept Library API from R

05 API Client Access

07 Phenotype.ID

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Documentation

For documentation related to the ConceptLibrary please visit the Wiki on Github

Documentation for the Python and R packages are also available on Github